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Document package generation workflow

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@ -146,6 +146,8 @@ Add `--overwrite` to regenerate an existing module directory.
layout, binaries, and supporting modules.
- [Metadata Harvesting Pipeline](docs/METADATA_PIPELINE.md) – how the metadata
indexer produces and validates the JSON records under `ai/metadata/`.
- [Package Module Generation](docs/PACKAGE_GENERATION.md) – end-to-end guide
for converting harvested metadata into Rust modules under `src/pkgs/by_name/`.
- `ai/notes.md` – scratchpad for ongoing research tasks (e.g., deeper jhalfs
integration).